Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015865125.1_cds_XP_016516224.1_28488
CDS Infomation

[gene=LOC107832843] [db_xref=GeneID:107832843] [protein=probable serine/threonine-protein kinase At1g54610] [protein_id=XP_016516224.1] [location=join(16495..16896,17003..17287,17386..17703,18702..18929,19594..19694,20066..20183,21799..22080)] [gbkey=CDS]
Sequence

ATGGGTTGTGTATTTGGGAAAGAGATTTCATCTTCTGAGACACCTAATGGGCAGGTTGTA
GTTGGAAGTAGGAGAGAAAATGGGGTAGATAGAGATTTGGCTGCCCCATCTGGGAGGAGA
GAGAAAGTTGGTACTGTAAATAAAGTGGATGCCGTAGGCGGCGGCGGAGGAGGTAGTGAT
GTTGGTGAAGTTGTGAATGGTAGGGATCAGAAGGGTGAGAATGCAAGGCATAGGGGTGAG
AGGAGAAGGTCTAAGCCTAATCCGAGGCTAAGCAACCCACCTAAGAATGTGCACGGCGAG
CAAGTGGCGGCTGGATGGCCGTCATGGCTTTCTGATGTAGCTGGAGAGGCTATCAATGGT
TGGATTCCGCGCAGGGCGGATGCATTTGAGAAGCTAGCTAAGATTGGGCAAGGTACTTAT
AGCAATGTCTATAAAGCTAGAGATAATCTAACGGGGGACATTGTTGCACTGAAGAAGGTT
AGATTTGATAATTTGGAGCCAGAGAGTGTGAGATTTATGGCAAGAGAGATTTTGATTTTG
CGCCGCTTGGATCATCCAAATGTTATGACGTTGCGAGGATTGGTTACGTCAAGGATGTCT
TGTAGTTTGTACCTCGTGTTTGATTATATGGATCATGATTTAGCTGGACTTGCTGCAAGC
CCTGGAATCAAGTTCACAGAGGCTCAGGTTAAATGTTACATGCATCAACTATTAGCAGGG
CTTGAACACTGTCATAACCGTCTTGTGTTGCATCGCGATATAAAAGGATCAAATCTTCTT
ATTGACAGTGGGGGAGCACTCAAGATTGCTGATTTTGGGTTGGCTTCTTTCTTCGATCCC
AATAAAAAGCAGCCCATGACTAGTCGTGTGGTTACTCTATGGTACAGACCACCAGAGCTT
CTACTTGGAGCCACCGACTATGGTGTTGGTGTTGATCTTTGGAGTGCTGGTTGTATTTTT
GCTGAGCTATTAGCTGGGAAACCCATTATGCCTGGTCGTACAGAGGTTGAACAGCTCCAC
AAGATCTTCAAGCTATGTGGATCTCCGTCAGAAGAATATTGGAAAAAGTCGAGGCTTCCA
CATGCAACTATATTCAAACCTCAGCAATCATACAGAAGATGTATAGCAGAAACTTTTAAA
GATTTTCCACCTTCATCGTTGTCATTGATTGAGACTCTTCTGGCCATTGATCCTGCTGAT
CGTCAGACAGCTACAGCTGCATTACAGAGTGCATTCTTTACTACCAAACCTTACGCCTGT
GAACCTTCCAGCCTTCCCAAATATCCACCCAGCAAAGAAATGGATGCTAAACGGCGAGAC
GAAGAATCTCGAAGACAAAGAGCTATTGGGAAAGCCAATGCTGATGGTGTAAGGAGAAAT
CGTCACCGTGATCGAGCAGTGAGGGCAATCCCTGCTCCTGAAGCCAACGCGGAGCTGCAA
GTCAATATTGATAGGCGGCGTCTAGTAACACAAGCAAACGCGAAGAGCAAGAGTGAAAAG
TTTCCTCCCCCACACCAGGATGGAACATTAGGTTATACCTTGGGTTCTTCACATCACATT
GATCCAGGCTATGAACCGTCAGAAGTCCCATTCACATCCATGAATTTCTCATATTCAAAA
GAACCGATCCAAACGTGGTCCGGCCCATTGGTGGAACCTGCCACTGGTGCTCCAAGAAGA
AAGACAAAGCCATCAAAGAAGGATTCTAACAAGAAAGGAAAAGAAAGCATGTAA

Peptide Sequence

PEP ID

XP_016516224.1
PEP Infomation

PREDICTED: probable serine/threonine-protein kinase At1g54610 [Nicotiana tabacum]
Sequence

MGCVFGKEISSSETPNGQVVVGSRRENGVDRDLAAPSGRREKVGTVNKVDAVGGGGGGSD
VGEVVNGRDQKGENARHRGERRRSKPNPRLSNPPKNVHGEQVAAGWPSWLSDVAGEAING
WIPRRADAFEKLAKIGQGTYSNVYKARDNLTGDIVALKKVRFDNLEPESVRFMAREILIL
RRLDHPNVMTLRGLVTSRMSCSLYLVFDYMDHDLAGLAASPGIKFTEAQVKCYMHQLLAG
LEHCHNRLVLHRDIKGSNLLIDSGGALKIADFGLASFFDPNKKQPMTSRVVTLWYRPPEL
LLGATDYGVGVDLWSAGCIFAELLAGKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSRLP
HATIFKPQQSYRRCIAETFKDFPPSSLSLIETLLAIDPADRQTATAALQSAFFTTKPYAC
EPSSLPKYPPSKEMDAKRRDEESRRQRAIGKANADGVRRNRHRDRAVRAIPAPEANAELQ
VNIDRRRLVTQANAKSKSEKFPPPHQDGTLGYTLGSSHHIDPGYEPSEVPFTSMNFSYSK
EPIQTWSGPLVEPATGAPRRKTKPSKKDSNKKGKESM

Transcript Sequence

Gene sequence data has not been registered.